Coach, they will get out of it. I say this as a Mets' fan. There is far too much talent on that team (the Yankees) for them not to. And it starts tonight, with the return of A-Roid A-Rod, Alex Rodriguez. With him in the lineup, the rest of the team will see a few more fastballs. Also, Mark Teixeira and CC Sabathia are notorious for being "slow starters." (So was Johan Santana with the Mets, but if he's "starting slow" with a 4-1 win/loss record, 0.91 ERA and 54 strikeouts, the rest of the National League is going to hate it when he "heats up.")
Also, getting back Brian Bruney for their bullpen will go a long way to keeping leads to get to Mariano Rivera (who didn't do so well last night). They'll come around--it may take a while, but they will.
ETA: A-Rod hit a 3-run HR in his first AB in Baltimore. On the first pitch that Jeremy Guthrie threw to him. And CC Sabathia pitched his second consecutive complete game. (The last one was a loss.)